Oceanography (OCN)

College of Fisheries and Ocean Sciences
Department of Oceanography
907-474-7210

OCN F102      Fact or Fishin': Case Studies in Fisheries and Marine Sciences
1 Credit

Offered Fall

This seminar will promote active learning, critical thinking and problem-solving through a series of case studies involving current issues in fisheries and marine sciences conservation and management. Students enrolled in this course will also receive instruction on fundamental skills required to successfully complete a four-year degree at UAF.

Cross-listed with FISH F102; MBI F102.

Lecture + Lab + Other: 1.5 + 0 + 0

Grading System: Letter Grades with option of Plus/Minus

OCN F103      The Harvest of the Sea
2 Credits

Offered Spring

This course will explore the scientific and popular literature related to the exploitation of global marine resources. Specific topics of the course will be based on three core themes: (1) early exploitation of marine resources; (2) overexploitation of marine stocks; and (3) the status and sustainability of marine resources.

Prerequisites: FISH F102; FISH F110; placement in WRTG F111X.

Cross-listed with FISH F103; MBI F103.

Lecture + Lab + Other: 2 + 0 + 0

Grading System: Letter Grades with option of Plus/Minus

OCN F111L      The Oceans Laboratory
0 Credit

Offered Fall, Spring and Summer

Provides laboratory experience emphasizing insights from biology, physics, chemistry and geology. Topics include the evolution of the ocean basins, seawater composition, generation of ocean currents and waves, and the combined processes that sustain life in the ocean. Societal topics related to climate change.

Co-requisites: MBI F111X or OCN F111X.

Cross-listed with MBI F111L.

Attributes: UAF GER Natural Science Req

Lecture + Lab + Other: 0 + 0 + 0

Grading System: Non-Graded

OCN F111X      The Oceans      (n)
4 Credits

Offered Fall, Spring and Summer

Broad study of our ocean through combining insights from biology, physics, chemistry and geology. Topics include evolution of the ocean basins, seawater composition, generation of ocean currents and waves, and the combined processes that sustain life in the ocean. Societal topics related to climate change, fisheries and pollution are discussed.

Prerequisites: Placement in WRTG F111X; placement in MATH F105.

Co-requisites: MBI F111L or OCN F111L.

Cross-listed with MBI F111X.

Attributes: UAF GER Natural Science Req

Lecture + Lab + Other: 3 + 3 + 0

Grading System: Letter Grades with option of Plus/Minus

OCN F211      Introduction to Marine Science I
3 Credits

Offered Fall

This course introduces students to the geology, chemistry and physics of the ocean and the roles of the hydrosphere, cryosphere and atmosphere in the climate system.

Prerequisites: MATH F151X (may be taken concurrently).

Lecture + Lab + Other: 3 + 0 + 0

Grading System: Letter Grades with option of Plus/Minus

OCN F303      Data Analysis and Writing for Aquatic Sciences
3 Credits

Offered Fall

In this course, students will develop skills in basic data analysis, scientific writing and interpretation of published research. This course will utilize public data sets and peer-reviewed scientific writing samples drawn from the fields of fisheries, marine sciences and limnology that address an important question in aquatic science.

Prerequisites: STAT F200X, OCN F211, MBI F212.

Lecture + Lab + Other: 3 + 0 + 0

Grading System: Letter Grades with option of Plus/Minus

OCN F315      Marine Geological Drama and Undersea Catastrophes
3 Credits

Offered Fall

Case studies of geological events that disrupt the ocean environment as an introduction to geological oceanography. Geological concepts are covered as part of the background and context for each one. The case studies include everyday geological drama, sudden catastrophes, and slow-motion catastrophes on a geologic time scale.

Prerequisites: OCN F111X or OCN F211.

Lecture + Lab + Other: 3 + 0 + 0

Grading System: Letter Grades with option of Plus/Minus

OCN F419      Concepts in Physical Oceanography
3 Credits

Offered Fall Even-numbered Years

This course establishes the physical concepts that drive ocean motion on our rotating earth including the roles of the Coriolis force, ocean stratification, wind driven and thermohaline circulation, tides and why the major ocean gyres exist.

Prerequisites: MATH F251X or PHYS F211X.

Lecture + Lab + Other: 3 + 0 + 0

Grading System: Letter Grades with option of Plus/Minus

OCN F425      Subarctic Oceanography Field Course
3 Credits

Offered Fall

This two-week intensive course provides students with skills and techniques for modern oceanographic investigation. Students develop, carry out and present their own field program conducted within fjords surrounding Seward, Alaska. An additional course fee covers ship time, lodging and meals in Seward. Fairbanks-to-Seward return travel costs are covered by students.

Prerequisites: OCN F211; MBI F212.

Stacked with OCN F625.

Lecture + Lab + Other: 11 + 20 + 17

Grading System: Letter Grades with option of Plus/Minus

OCN F433      Integrative Oceanography
1 Credit

Offered Fall

This course is designed to stimulate discussions that span the core oceanography disciplines (biology, chemistry, geology and physics) and to improve understanding of the inter-relationships among them. When taken at the graduate level, students will take turns choosing synthetic publications and leading discussions.

Prerequisites: MBI F212; OCN F211; at least one OCN F400-level course.

Lecture + Lab + Other: 1 + 0 + 0

Grading System: Pass/Fail Grades

Repeatable for Credit: May be taken 2 times for up to 2 credits

OCN F443      Fisheries Oceanography
4 Credits

Offered Fall Odd-numbered Years

Oceanography of marine processes affecting vertebrates and invertebrates. Interactions between fisheries resources and physical and biological oceanography, and climatological and meteorological conditions that support sustainable management. Topics include recruitment, transport, mortality, feeding, distribution, abundance, El Nino/La Nina, regime shifts, and climate change. Global to local scales. Worldwide ecosystems and examples.

Prerequisites: FISH F110 or FISH F288; STAT F200X, OCN F111X, or CHEM F105X; PHYS F123X.

Cross-listed with FISH F443.

Stacked with OCN F643, FISH F643.

Lecture + Lab + Other: 4 + 0 + 0

Grading System: Letter Grades with option of Plus/Minus

OCN F450      Biological Oceanography
3 Credits

Offered Fall

Survey of biological processes emphasizing organic matter synthesis and transfer including topics essential to a basic understanding of contemporary biological oceanography.

Prerequisites: MBI F212 for undergraduate students; upper division standing in a science major.

Stacked with OCN F650.

Lecture + Lab + Other: 3 + 0 + 0

Grading System: Letter Grades with option of Plus/Minus

OCN F453      Zooplankton Ecology
3 Credits

Offered Fall Even-numbered Years

Survey of marine zooplankton and processes that influence their production and dynamics. Emphasis is placed upon zooplankton communities of northeast Pacific and Arctic oceans. Field and lab methodology reviewed include fixing, preserving, subsampling, identifying and quantifying zooplankton collections. Reviewed laboratory techniques cover culture of zooplankton, including physiological measurements of parameters.

Prerequisites: MBI F212; OCN F211; OCN F450.

Stacked with OCN F653.

Lecture + Lab + Other: 3 + 0 + 0

Grading System: Letter Grades with option of Plus/Minus

OCN F455      Phytoplankton and Marine Microbes
3 Credits

Offered Spring Odd-numbered Years

An in-depth exploration of microbial life in the marine environment focusing on phytoplankton, microzooplankton, bacteria and archaea. Students will learn the importance of marine microbes, including their impacts on fisheries and biogeochemical cycles. Topics include harmful algal blooms and the impacts of climate change on marine microbial communities.

Prerequisites: MBI F212.

Stacked with OCN F655.

Lecture + Lab + Other: 3 + 0 + 0

Grading System: Letter Grades with option of Plus/Minus

OCN F459      Computer Programming for Scientific Applications
3 Credits

Offered Spring Odd-numbered Years

Introduction to scientific programming techniques and applications. This MATLAB-based course will cover programming fundamentals, input/output operations, and mapping and other data visualization techniques. Students will work with NetCDF and OpenDAP protocols and remote large-volume data repositories. No prior programming experience required.

Prerequisites: Senior or graduate level standing.

Lecture + Lab + Other: 3 + 0 + 0

Grading System: Letter Grades with option of Plus/Minus

OCN F460      Chemical Oceanography
3 Credits

Offered Spring

An integrated study of the chemical, biological, geological and physical processes that control the chemical composition of seawater. Boundary interactions with the atmosphere and lithosphere, biogeochemical cycles and tracers of these complex cycles are examined. The marine chemistry of inorganic carbon is considered in detail.

Prerequisites: BIOL F116X; CHEM F106X; upper-division standing.

Stacked with CHEM F660; OCN F660.

Lecture + Lab + Other: 3 + 0 + 0

Grading System: Letter Grades with option of Plus/Minus

OCN F463      Chemical Coastal Processes
3 Credits

Offered Spring Even-numbered Years

A study of chemical processes in the coastal ocean, including interactions at boundaries, and physical and biological controls on the chemistry of coastal environments. Key topics include riverine input, coastal acidification, photochemistry, coastal productivity and challenges in coastal management. Intended for students with general chemistry and marine science backgrounds.

Prerequisites: CHEM F105X; CHEM F106X; OCN F111X or (OCN F211; MBI F212); upper-division standing.

Stacked with OCN F663.

Lecture + Lab + Other: 3 + 0 + 0

Grading System: Letter Grades with option of Plus/Minus

OCN F481      The Ocean and Global Change
3 Credits

Offered Fall

Explores how human activities are affecting Earth's oceans. Topics include climate change, sea-level rise, coastal erosion, declining sea ice, shifting ecosystems, ocean acidification, pollution and various mitigation proposals. The course will investigate the causes and effects of these changes and consider the challenges and opportunities that arise from them.

Prerequisites: Upper-division standing.

Stacked with OCN F681.

Lecture + Lab + Other: 3 + 0 + 0

Grading System: Letter Grades with option of Plus/Minus

OCN F492      Seminar
1-6 Credits

Lecture + Lab + Other: 0 + 0 + 0

Grading System: Letter Grades with option of Plus/Minus

Repeatable for Credit: May be taken unlimited times for up to 99 credits

OCN F498      Research
1-6 Credits

Lecture + Lab + Other: 1-6 + 0 + 0

Grading System: Letter Grades with option of Plus/Minus

Repeatable for Credit: May be taken unlimited times for up to 99 credits

OCN F499      Senior Thesis
3 Credits

Under Oceanography faculty mentorship, students will undertake a self-designed senior thesis capstone project based on field/lab data collected during a field course or work with their mentor. They must present results at a UAF event or scientific conference and are encouraged to publish in a peer-reviewed journal.

Prerequisites: Permission of a fisheries and ocean sciences faculty mentor.

Lecture + Lab + Other: 0 + 0 + 9

Grading System: Letter Grades with option of Plus/Minus

Repeatable for Credit: May be taken 2 times for up to 6 credits

OCN F620      Physical Oceanography
4 Credits

Offered Fall

Physical description of the sea, physical properties of seawater, methods and measurements, boundary processes, currents, tides and waves, and regional oceanography.

Prerequisites: MATH F253X; PHYS F123X or PHYS F211X; science or engineering degree.

Lecture + Lab + Other: 3 + 3 + 0

Grading System: Letter Grades with option of Plus/Minus

OCN F625      Subarctic Oceanography Field Course
3 Credits

Offered Fall

This two-week intensive course provides students with skills and techniques for modern oceanographic investigation. Students develop, carry out and present their own field program conducted within fjords surrounding Seward, Alaska. An additional course fee covers ship time, lodging and meals in Seward. Fairbanks-to-Seward return travel costs are covered by students.

Stacked with OCN F425.

Lecture + Lab + Other: 11 + 20 + 17

Grading System: Letter Grades with option of Plus/Minus

OCN F627      Statistical Computing with R
2 Credits

Offered Fall

Using the free, open-source software R to teach computing, programming, and modeling concepts for the statistical computing of fisheries and biological data. Prepares students for other graduate-level, quantitative fisheries courses and covers exploratory statistical and graphical analyses, as well as computer-intensive methods such as bootstrapping and randomization tests.

Prerequisites: STAT F200X; STAT F401; proficiency with Excel.

Cross-listed with FISH F627; MBI F627.

Lecture + Lab + Other: 1 + 3 + 0

Grading System: Letter Grades with option of Plus/Minus

OCN F630      Geological Oceanography
3 Credits

Offered Spring

Topography and structure of the ocean floor. Theory of plate tectonics. Geology of ocean basins, continental slope, shelf and coastal environments. Major sediment types and distributions. Sediment transport and deposition. Interaction between seawater, rock, and sediment. Paleoceanography. Upper-division standing are invited to contact the instructor.

Prerequisites: Graduate standing.

Lecture + Lab + Other: 3 + 0 + 0

Grading System: Letter Grades with option of Plus/Minus

OCN F631      Data Analysis in Community Ecology
3 Credits

Offered Spring Odd-numbered Years

This course will provide an overview of statistical methods that have been specifically developed to aid our understanding and interpretation of the structure, abundance, and distribution of species and communities in relation to resources and the environment.

Prerequisites: STAT F200X; STAT F401; FISH F627 (Statistical Computing with R) or familiarity with R, general ecology, graduate standing in fisheries.

Cross-listed with FISH F631; MBI F631.

Lecture + Lab + Other: 3 + 0 + 0

Grading System: Letter Grades with option of Plus/Minus

OCN F633      Integrative Oceanography
1 Credit

Offered Fall

This course is designed to stimulate discussions that span the core oceanography disciplines (biology, chemistry, geology and physics) and to improve understanding of the inter-relationships among them. When taken at the graduate level, students will take turns choosing synthetic publications and leading discussions.

Prerequisites: OCN F620; OCN F630; OCN F650; OCN F660; graduate standing.

Lecture + Lab + Other: 1 + 0 + 0

Grading System: Pass/Fail Grades

Repeatable for Credit: May be taken 2 times for up to 2 credits

OCN F643      Fisheries Oceanography
4 Credits

Offered Fall Odd-numbered Years

Oceanography of marine processes affecting vertebrates and invertebrates. Interactions between fisheries resources and physical and biological oceanography, and climatological and meteorological conditions that support sustainable management. Topics include recruitment, transport, mortality, feeding, distribution, abundance, El Nino/La Nina, regime shifts, and climate change. Global to local scales. Worldwide ecosystems and examples.

Prerequisites: Graduate standing.

Cross-listed with FISH F643.

Stacked with OCN F443, FISH F443.

Lecture + Lab + Other: 4 + 0 + 0

Grading System: Letter Grades with option of Plus/Minus

OCN F650      Biological Oceanography
3 Credits

Offered Fall

Survey of biological processes emphasizing organic matter synthesis and transfer including topics essential to a basic understanding of contemporary biological oceanography.

Prerequisites: Upper-division standing in a science major.

Stacked with MBI F450.

Lecture + Lab + Other: 3 + 0 + 0

Grading System: Letter Grades with option of Plus/Minus

OCN F653      Zooplankton Ecology
3 Credits

Offered Fall Even-numbered Years

Survey of marine zooplankton and processes that influence their production and dynamics. Emphasis is placed upon zooplankton communities of northeast Pacific and Arctic oceans. Field and lab methodology reviewed include fixing, preserving, subsampling, identifying and quantifying zooplankton collections. Reviewed laboratory techniques cover culture of zooplankton, including physiological measurements of parameters.

Stacked with OCN F453.

Lecture + Lab + Other: 3 + 0 + 0

Grading System: Letter Grades with option of Plus/Minus

OCN F655      Phytoplankton and Marine Microbes
3 Credits

Offered Spring Odd-numbered Years

An in-depth exploration of microbial life in the marine environment focusing on phytoplankton, microzooplankton, bacteria and archaea. Students will learn the importance of marine microbes, including their impacts on fisheries and biogeochemical cycles. Topics include harmful algal blooms and the impacts of climate change on marine microbial communities.

Stacked with OCN F455.

Lecture + Lab + Other: 3 + 0 + 0

Grading System: Letter Grades with option of Plus/Minus

OCN F660      Chemical Oceanography
3 Credits

Offered Spring

An integrated study of the chemical, biological, geological and physical processes that control the chemical composition of seawater. Boundary interactions with the atmosphere and lithosphere, biogeochemical cycles and tracers of these complex cycles are examined. The marine chemistry of inorganic carbon is considered in detail.

Prerequisites: Graduate standing.

Cross-listed with CHEM F660.

Stacked with OCN F460.

Lecture + Lab + Other: 3 + 0 + 0

Grading System: Letter Grades with option of Plus/Minus

OCN F663      Chemical Coastal Processes
3 Credits

Offered Spring Even-numbered Years

A study of chemical processes in the coastal ocean, including interactions at boundaries, and physical and biological controls on the chemistry of coastal environments. Key topics include riverine input, coastal acidification, photochemistry, coastal productivity and challenges in coastal management. Intended for students with general chemistry and marine science backgrounds.

Prerequisites: Graduate standing.

Stacked with OCN F463.

Lecture + Lab + Other: 3 + 0 + 0

Grading System: Letter Grades with option of Plus/Minus

OCN F677      Scientific Writing Techniques
3 Credits

Offered As Demand Warrants

This class takes a comprehensive approach to learning to write for scientific audiences with skill and clarity. Writing a manuscript or grant proposal is approached in sections, which are revised throughout the semester in response to reviews from classmates. Topics include writing approaches, storytelling, style, grammar, punctuation and editorial review.

Prerequisites: Graduate standing or permission of instructor.

Cross-listed with FISH F677.

Lecture + Lab + Other: 3 + 0 + 0

Grading System: Pass/Fail Grades

OCN F681      The Ocean and Global Change
3 Credits

Offered Fall

Explores how human activities are affecting Earth's oceans. Topics include climate change, sea-level rise, coastal erosion, declining sea ice, shifting ecosystems, ocean acidification, pollution and various mitigation proposals. The course will investigate the causes and effects of these changes and consider the challenges and opportunities that arise from them.

Stacked with OCN F481.

Lecture + Lab + Other: 3 + 0 + 0

Grading System: Letter Grades with option of Plus/Minus

OCN F692      Seminar
1-6 Credits

Lecture + Lab + Other: 1-6 + 0 + 0

Grading System: Letter Grades with option of Plus/Minus

Repeatable for Credit: May be taken unlimited times for up to 99 credits

OCN F692P      Seminar
1-6 Credits

Lecture + Lab + Other: 1-6 + 0 + 0

Grading System: Pass/Fail Grades

Repeatable for Credit: May be taken unlimited times for up to 99 credits

OCN F698      Non-thesis Research/Project
1-9 Credits

Lecture + Lab + Other: 0 + 0 + 0

Grading System: Pass/Fail Grades

Repeatable for Credit: May be taken unlimited times for up to 99 credits

OCN F699      Thesis
1-12 Credits

Lecture + Lab + Other: 0 + 0 + 0

Grading System: Pass/Fail Grades

Repeatable for Credit: May be taken unlimited times for up to 99 credits